=====Lab Notebooks=====
  * [[https://osf.io/m5tzh/| global_ph_prevalence]]

===== Open Source Resources =====
==== Datasets ====
  * [[https://www.ncbi.nlm.nih.gov/pmc/tools/developers/ | NCBI Developer Tools]]
  * [[https://github.com/ncbi/ | NCBI Github]]
  * [[https://www.singlecellatlas.org/ |Single Cell Atlas]]
  * [[https://physionet.org/ | PhysioNet]]
  * [[https://datacatalog.hshsl.umaryland.edu/ | UMMC Datasets]]

==== Tools ====
  * [[https://reporter.nih.gov/project-details/10705015 | Jeremy Warner, HemOnc.org]]
  * [[https://deepphe.github.io/ | DeepPhe]]
  * [[http://ctakes.apache.org/ | cTAKES]]
  * [[https://www.chip.org/ | Computational Health Informatics Program]]
  * [[https://usegalaxy.org/ | Galaxy Cloud Computing]]

===== Research Types =====
==== Systematic Reviews ====
  * [[https://www.covidence.org | Covidence]]
  * [[http://www.prisma-statement.org/Default.aspx | PRISMA]]
    * [[https://estech.shinyapps.io/prisma_flowdiagram/ | PRISMA Diagram R package]]

===== Coding =====
==== R ====
  * [[https://hshsl-training.github.io/cdabs_r_series_2022-07/ | UMMS CDABS, R Workshop]]
  * [[https://ropensci.org/ | rOpenSci]]
==== python ====
  * **Tutorials**
    * [[https://scipy-lectures.org/intro/| SciPy]]
    * [[https://numpy.org/devdocs/user/absolute_beginners.html|NumPy]]

==== MAKE files ====
  * [[http://kbroman.org/minimal_make/ | Minimal MAKE files]]
  * [[https://robjhyndman.com/hyndsight/makefiles/ | MAKE files for Latex]]
  * [[http://zmjones.com/make/| MAKE Reproducible Research]]
===== Statistics =====
  * [[https://hbiostat.org]]
    * [[https://hbiostat.org/rflow/|R workflow]]
    * [[https://hbiostat.org/rr/ | Reproducible Research]]

  * [[https://bookdown.org/ybrandvain/Applied-Biostats/ | Free R-based Biostats Book]]

  * [[https://epirhandbook.com/en/index.html | Epidemiologist R Handbook]]

  * [[https://www.nature.com/collections/qghhqm/ | Nature: Statistics for Biologists]]